BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B10SP1|AL427724
(947 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1383 1732 0.0
>3x_Contig1383
Length = 6139
Score = 1732 bits (860), Expect = 0.0
Identities = 912/940 (97%), Gaps = 2/940 (0%)
Strand = Plus / Minus
Query: 1 aggttcattaccgaacaaaaatctcagatcattaacagttcgatgttgtcgttattaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3214 aggttcattaccgaacaaaaatctcagatcattaacagttcgatgttgtcgttattaaca 3155
Query: 61 ctggaacctaatggccagttttcctatactcccaaaggcgatas-acaaggcaaatgata 119
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3154 ctggaacctaatggccagttttcctatactcccaaaggcgatagcacaaggcaaatgata 3095
Query: 120 tcaatagttgatcaamatctttccatttacgatttagagtttaatgaaactaaaaactca 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3094 tcaatagttgatcaaaatctttccatttacgatttagagtttaatgaaactaaaaactca 3035
Query: 180 ggatacctaatattcgagaagttcaaatctaaggtatggttgattgcmttaccaaaragt 239
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 3034 ggatacctaatattcgagaagttcaaatctaaggtatggttgattgcattaccaaaaagt 2975
Query: 240 gctccgagtgatttcgtgattaattcaaggcaaaaatgggttgatagcttattcaagact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2974 gctccgagtgatttcgtgattaattcaaggcaaaaatgggttgatagcttattcaagact 2915
Query: 300 aaggccgccttggagtctgagarattgaccaagavagttgataacttaagtttgavaccg 359
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 2914 aaggccgccttggagtctgagaaattgaccaagaaagttgataacttaagtttgaaaccg 2855
Query: 360 cctgasacttgttccacttcatcaaagccacgaaagtcaccgcaagataatatgtttgtt 419
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 cctgaaacttgttccacttcatcaaagccacgaaagtcaccgcaagataatatgtttgtt 2795
Query: 420 tcaagtagtagagcagaggtactgtacactctgaacaaacagaaaagaagcaatacggat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2794 tcaagtagtagagcagaggtactgtacactctgaacaaacagaaaagaagcaatacggat 2735
Query: 480 gctgcaaatggagcgagagctgctttcaagaatatgaatmamtganaatatggagtttcc 539
||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 2734 gctgcaaatggagcgagagctgctttcaagaatatgaataaatgaaaatatggagtttcc 2675
Query: 540 attcaaacttcattctttcaagaaccacatagattttnaatagtaactggtaaatmtaca 599
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 2674 attcaaacttcattctttcaagaaccacatagattttaaatagtaactggtaaatataca 2615
Query: 600 gtatatsatgataatgaatggttatgggtttgcmaattgtgtgttctctgaatacatgat 659
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2614 gtatataatgataatgaatggttatgggtttgcaaattgtgtgttctctgaatacatgat 2555
Query: 660 atagamvmmtatttvacgggataatgatggcagtcattaasttattaaagaggttagaaa 719
||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 2554 atagaaaaatatttaacgggataatgatggcagtaattaaattattaaagaggttagaaa 2495
Query: 720 tcgattgatgtttatatgccgacagaatgadagakatgaratgatagtaaaacacataaa 779
|||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 2494 tcgattgatgtttatatgccgacagaatgaaagaaatgaaatgatagtaaaacacataaa 2435
Query: 780 aactttgcaatggattcattttattcaaagatagatgcatcaaagtataagctgggatcc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 aactttgcaatggattcattttattcaaagatagatgcatcaaagtataagctgggatcc 2375
Query: 840 aatgcactaatatcagcggatttagcttcaccgtcaagtaatagttcactcataacttta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 aatgcactaatatcagcggatttagcttcaccgtcaagtaatagttcactcataacttta 2315
Query: 900 cctgttgccggagcgttgttwata-cccaacaagagtggc 938
|||||||||||||||||||| ||| |||||||||||||||
Sbjct: 2314 cctgttgccggagcgttgttaataccccaacaagagtggc 2275
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5871
Number of Sequences: 1807
Number of extensions: 5871
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)